Actinidia chinensis
3 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Solanum lycopersicum | |
|
Aegilops tauschii
6 alignments 3 syntenies
Arabidopsis thaliana | | Brachypodium distachyon | | Oryza sativa Japonica Group | | Triticum aestivum | | Triticum dicoccoides | | Triticum turgidum | |
|
Aegilops umbellulata
1 alignment
Oryza sativa Japonica Group | |
|
Amborella trichopoda
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Ananas comosus
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Arabidopsis halleri
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Arabidopsis lyrata
2 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Arabidopsis thaliana
75 alignments 3 syntenies
Actinidia chinensis | | Aegilops tauschii | | Amborella trichopoda | | Ananas comosus | | Arabidopsis halleri | | Arabidopsis lyrata | | Arabis alpina | | Beta vulgaris | | Brachypodium distachyon | | Brassica juncea | | Brassica napus | | Brassica oleracea | | Brassica rapa R-o-18 | | Camelina sativa | | Cannabis sativa female | | Capsicum annuum | | Chenopodium quinoa | | Chlamydomonas reinhardtii | | Chondrus crispus | | Citrullus lanatus | | Citrus clementina | | Coffea canephora | | Corchorus capsularis | | Corymbia citriodora | | Cucumis melo | | Cucumis sativus | | Cyanidioschyzon merolae | | Daucus carota | | Eragrostis curvula | | Eucalyptus grandis | | Eutrema salsugineum | | Galdieria sulphuraria | | Glycine max | | Gossypium raimondii | | Ipomoea triloba | | Kalanchoe fedtschenkoi | | Leersia perrieri | | Lupinus angustifolius | | Malus domestica Golden | | Marchantia polymorpha | | Nicotiana attenuata | | Nymphaea colorata | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | | Panicum hallii HAL2 | | Papaver somniferum | | Phaseolus vulgaris | | Physcomitrium patens | | Pistacia vera | | Prunus dulcis | | Prunus persica | | Rosa chinensis | | Selaginella moellendorffii | | Setaria italica | | Setaria viridis | | Solanum lycopersicum | | Solanum tuberosum | | Sorghum bicolor | | Theobroma cacao Matina 1-6 | | Trifolium pratense | | Triticum aestivum | | Triticum dicoccoides | | Triticum turgidum | | Vigna angularis | | Vigna radiata | | Vitis vinifera | |
|
Arabis alpina
1 alignment 1 synteny
|
Arachis hypogaea
1 alignment
|
Asparagus officinalis
1 alignment
Oryza sativa Japonica Group | |
|
Avena sativa OT3098
1 alignment
Oryza sativa Japonica Group | |
|
Avena sativa Sang
1 alignment
Oryza sativa Japonica Group | |
|
Beta vulgaris
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Brachypodium distachyon
7 alignments 2 syntenies
Aegilops tauschii | | Arabidopsis thaliana | | Oryza sativa Japonica Group | | Triticum aestivum | | Triticum dicoccoides | | Triticum turgidum | | Zea mays | |
|
Brassica juncea
1 alignment
|
Brassica napus
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Brassica oleracea
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Brassica rapa R-o-18
1 alignment
|
Cajanus cajan (pigeon pea) - GCA_000340665.1
1 alignment 1 synteny
|
Camelina sativa
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Cannabis sativa female
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Capsicum annuum
3 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Solanum lycopersicum | |
|
Chenopodium quinoa
1 alignment
|
Chlamydomonas reinhardtii
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Chondrus crispus
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Citrullus lanatus
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Citrus clementina
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Coffea canephora
3 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Solanum lycopersicum | |
|
Corchorus capsularis
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Corylus avellana
1 alignment 1 synteny
|
Corymbia citriodora
1 alignment
|
Cucumis melo
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Cucumis sativus
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Cyanidioschyzon merolae
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Cynara cardunculus
1 alignment
|
Daucus carota
3 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Solanum lycopersicum | |
|
Digitaria exilis
1 alignment
Oryza sativa Japonica Group | |
|
Dioscorea rotundata
1 alignment
Oryza sativa Japonica Group | |
|
Echinochloa crus-galli
1 alignment
Oryza sativa Japonica Group | |
|
Eragrostis curvula
2 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Eragrostis tef
1 alignment
Oryza sativa Japonica Group | |
|
Eucalyptus grandis
1 alignment
|
Eutrema salsugineum
1 alignment
|
Ficus carica
1 alignment 1 synteny
|
Fraxinus excelsior
1 alignment
|
Galdieria sulphuraria
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Glycine max
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Glycine soja (Wild soybean)
1 alignment
|
Gossypium raimondii
1 alignment
|
Helianthus annuus
1 alignment
|
Hordeum vulgare
2 alignments 1 synteny
Oryza sativa Japonica Group | | Triticum aestivum | |
|
Ipomoea triloba
3 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Solanum lycopersicum | |
|
Juglans regia
1 alignment
|
Kalanchoe fedtschenkoi
1 alignment
|
Lactuca sativa
1 alignment
|
Lathyrus sativus
1 alignment
|
Leersia perrieri
10 alignments 2 syntenies
Arabidopsis thaliana | | Oryza barthii | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Lolium perenne
1 alignment
Oryza sativa Japonica Group | |
|
Lupinus angustifolius
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Malus domestica Golden
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Manihot esculenta
1 alignment
|
Marchantia polymorpha
1 alignment
|
Medicago truncatula
29 alignments 8 syntenies
Arachis hypogaea | | Cajanus cajan (pigeon pea) - GCA_000340665.1 | | Cannabis sativa female | | Citrullus lanatus | | Corylus avellana | | Cucumis melo | | Cucumis sativus | | Ficus carica | | Glycine max | | Glycine soja (Wild soybean) | | Juglans regia | | Lathyrus sativus | | Lupinus angustifolius | | Malus domestica Golden | | Manihot esculenta | | Phaseolus vulgaris | | Pisum sativum | | Populus trichocarpa | | Prunus avium | | Prunus dulcis | | Prunus persica | | Quercus lobata | | Quercus suber | | Rosa chinensis | | Trifolium pratense | | Vicia faba | | Vigna angularis | | Vigna radiata | | Vigna unguiculata | |
|
Musa acuminata
1 alignment
Oryza sativa Japonica Group | |
|
Nicotiana attenuata
3 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Solanum lycopersicum | |
|
Nymphaea colorata
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Olea europaea
1 alignment
|
Oryza barthii
12 alignments 9 syntenies
Arabidopsis thaliana | | Leersia perrieri | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza brachyantha
11 alignments 9 syntenies
Arabidopsis thaliana | | Oryza barthii | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza glaberrima
12 alignments 9 syntenies
Arabidopsis thaliana | | Leersia perrieri | | Oryza barthii | | Oryza brachyantha | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza glumipatula
12 alignments 9 syntenies
Arabidopsis thaliana | | Leersia perrieri | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza longistaminata
12 alignments
Arabidopsis thaliana | | Leersia perrieri | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza meridionalis
12 alignments 10 syntenies
Arabidopsis thaliana | | Leersia perrieri | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza nivara
12 alignments 9 syntenies
Arabidopsis thaliana | | Leersia perrieri | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza punctata
11 alignments 9 syntenies
Arabidopsis thaliana | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza rufipogon
12 alignments 9 syntenies
Arabidopsis thaliana | | Leersia perrieri | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza sativa Japonica Group | |
|
Oryza sativa (Geng/Japonica-sbtrp var. Chao Meo)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Geng/Japonica-trop1 var. Azucena)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Geng/Japonica-trop2 var. Ketan Nangka)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-1A var. Zhenshan 97)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-1B1 var. IR64)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-1B2 var. PR106)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-2A var. Gobol Sail)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-2B var. Larha Mugad)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-3A var. Lima)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-3B1 var. Khao Yai Guang)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-3B2 var. Liu Xu)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (Xian/Indica-adm var. Minghui 63)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (circum-Aus1 var. N22)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (circum-Aus2 var. Natel Boro)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa (circum-Basmati var. ARC 10497)
1 alignment 1 synteny
Oryza sativa Japonica Group | |
|
Oryza sativa Indica Group
12 alignments 9 syntenies
Arabidopsis thaliana | | Leersia perrieri | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa Japonica Group | |
|
Oryza sativa Japonica Group
95 alignments 32 syntenies
Actinidia chinensis | | Aegilops tauschii | | Aegilops umbellulata | | Amborella trichopoda | | Ananas comosus | | Arabidopsis halleri | | Arabidopsis lyrata | | Arabidopsis thaliana | | Asparagus officinalis | | Avena sativa OT3098 | | Avena sativa Sang | | Beta vulgaris | | Brachypodium distachyon | | Brassica napus | | Brassica oleracea | | Camelina sativa | | Cannabis sativa female | | Capsicum annuum | | Chlamydomonas reinhardtii | | Chondrus crispus | | Citrullus lanatus | | Citrus clementina | | Coffea canephora | | Corchorus capsularis | | Cucumis melo | | Cucumis sativus | | Cyanidioschyzon merolae | | Daucus carota | | Digitaria exilis | | Dioscorea rotundata | | Echinochloa crus-galli | | Eragrostis curvula | | Eragrostis tef | | Galdieria sulphuraria | | Glycine max | | Hordeum vulgare | | Ipomoea triloba | | Leersia perrieri | | Lolium perenne | | Lupinus angustifolius | | Malus domestica Golden | | Musa acuminata | | Nicotiana attenuata | | Nymphaea colorata | | Oryza barthii | | Oryza brachyantha | | Oryza glaberrima | | Oryza glumipatula | | Oryza sativa Indica Group | | Oryza longistaminata | | Oryza meridionalis | | Oryza nivara | | Oryza punctata | | Oryza rufipogon | | Oryza sativa (circum-Basmati var. ARC 10497) | | Oryza sativa (Geng/Japonica-trop1 var. Azucena) | | Oryza sativa (Geng/Japonica-sbtrp var. Chao Meo) | | Oryza sativa (Xian/Indica-2A var. Gobol Sail) | | Oryza sativa (Xian/Indica-1B1 var. IR64) | | Oryza sativa (Geng/Japonica-trop2 var. Ketan Nangka) | | Oryza sativa (Xian/Indica-3B1 var. Khao Yai Guang) | | Oryza sativa (Xian/Indica-2B var. Larha Mugad) | | Oryza sativa (Xian/Indica-3A var. Lima) | | Oryza sativa (Xian/Indica-3B2 var. Liu Xu) | | Oryza sativa (Xian/Indica-adm var. Minghui 63) | | Oryza sativa (circum-Aus1 var. N22) | | Oryza sativa (circum-Aus2 var. Natel Boro) | | Oryza sativa (Xian/Indica-1B2 var. PR106) | | Oryza sativa (Xian/Indica-1A var. Zhenshan 97) | | Panicum hallii HAL2 | | Phaseolus vulgaris | | Physcomitrium patens | | Pistacia vera | | Prunus dulcis | | Prunus persica | | Rosa chinensis | | Saccharum spontaneum | | Secale cereale | | Selaginella moellendorffii | | Setaria italica | | Setaria viridis | | Solanum lycopersicum | | Solanum tuberosum | | Sorghum bicolor | | Theobroma cacao Matina 1-6 | | Trifolium pratense | | Triticum aestivum | | Triticum dicoccoides | | Triticum spelta | | Triticum timopheevii | | Triticum turgidum | | Triticum urartu | | Vigna angularis | | Vigna radiata | | Zea mays | |
|
Panicum hallii HAL2
2 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Papaver somniferum
1 alignment
|
Phaseolus vulgaris
3 alignments 1 synteny
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Physcomitrium patens
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Pistacia vera
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Pisum sativum
1 alignment
|
Populus trichocarpa
1 alignment
|
Prunus avium
1 alignment
|
Prunus dulcis
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Prunus persica
3 alignments 1 synteny
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Quercus lobata
1 alignment
|
Quercus suber
1 alignment
|
Rosa chinensis
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Saccharum spontaneum
2 alignments
Oryza sativa Japonica Group | | Triticum aestivum | |
|
Secale cereale
2 alignments 1 synteny
Oryza sativa Japonica Group | | Triticum aestivum | |
|
Selaginella moellendorffii
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Sesamum indicum
1 alignment
|
Setaria italica
3 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Triticum aestivum | |
|
Setaria viridis
2 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Solanum lycopersicum
15 alignments 4 syntenies
Actinidia chinensis | | Arabidopsis thaliana | | Capsicum annuum | | Coffea canephora | | Cynara cardunculus | | Daucus carota | | Fraxinus excelsior | | Helianthus annuus | | Ipomoea triloba | | Lactuca sativa | | Nicotiana attenuata | | Olea europaea | | Oryza sativa Japonica Group | | Sesamum indicum | | Solanum tuberosum | |
|
Solanum tuberosum
3 alignments 1 synteny
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Solanum lycopersicum | |
|
Sorghum bicolor
4 alignments 2 syntenies
Arabidopsis thaliana | | Oryza sativa Japonica Group | | Triticum aestivum | | Zea mays | |
|
Theobroma cacao Matina 1-6
2 alignments
Arabidopsis thaliana | | Oryza sativa Japonica Group | |
|
Trifolium pratense
3 alignments
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | |
|
Triticum aestivum
27 alignments 12 syntenies
Aegilops tauschii | | Arabidopsis thaliana | | Brachypodium distachyon | | Hordeum vulgare | | Oryza sativa Japonica Group | | Saccharum spontaneum | | Secale cereale | | Setaria italica | | Sorghum bicolor | | Triticum aestivum Arinalrfor | | Triticum aestivum Jagger | | Triticum aestivum Julius | | Triticum aestivum Kariega | | Triticum aestivum Lancer | | Triticum aestivum Landmark | | Triticum aestivum Mace | | Triticum aestivum Sy Mattis | | Triticum aestivum Norin61 | | Triticum aestivum Paragon | | Triticum aestivum Renan | | Triticum aestivum Stanley | | Triticum dicoccoides | | Triticum spelta | | Triticum timopheevii | | Triticum turgidum | | Triticum urartu | | Zea mays | |
|
Triticum aestivum Arinalrfor
1 alignment
|
Triticum aestivum Jagger
1 alignment
|
Triticum aestivum Julius
1 alignment
|
Triticum aestivum Kariega
1 alignment 1 synteny
|
Triticum aestivum Lancer
1 alignment
|
Triticum aestivum Landmark
1 alignment
|
Triticum aestivum Mace
1 alignment
|
Triticum aestivum Norin61
1 alignment
|
Triticum aestivum Paragon
1 alignment 1 synteny
|
Triticum aestivum Renan
1 alignment 1 synteny
|
Triticum aestivum Stanley
1 alignment
|
Triticum aestivum Sy Mattis
1 alignment 1 synteny
|
Triticum dicoccoides
6 alignments 3 syntenies
Aegilops tauschii | | Arabidopsis thaliana | | Brachypodium distachyon | | Oryza sativa Japonica Group | | Triticum aestivum | | Triticum turgidum | |
|
Triticum spelta
2 alignments 1 synteny
Oryza sativa Japonica Group | | Triticum aestivum | |
|
Triticum timopheevii
2 alignments 1 synteny
Oryza sativa Japonica Group | | Triticum aestivum | |
|
Triticum turgidum
6 alignments 3 syntenies
Aegilops tauschii | | Arabidopsis thaliana | | Brachypodium distachyon | | Oryza sativa Japonica Group | | Triticum aestivum | | Triticum dicoccoides | |
|
Triticum urartu
2 alignments 1 synteny
Oryza sativa Japonica Group | | Triticum aestivum | |
|
Vicia faba
1 alignment
|
Vigna angularis
4 alignments 2 syntenies
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | | Vigna radiata | |
|
Vigna radiata
4 alignments 2 syntenies
Arabidopsis thaliana | | Medicago truncatula | | Oryza sativa Japonica Group | | Vigna angularis | |
|
Vigna unguiculata
1 alignment 1 synteny
|
Vitis vinifera
1 alignment
|
Zea mays
4 alignments 2 syntenies
Brachypodium distachyon | | Oryza sativa Japonica Group | | Sorghum bicolor | | Triticum aestivum | |
|