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Triticum aestivum vs Triticum urartu Synteny results

The syntenic regions between Triticum aestivum (Triticum aestivum, IWGSC) and Triticum urartu (Triticum urartu, IGDB) were extracted from their pairwise alignment in Ensembl Plants release 106. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 2,628 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Triticum aestivum

Uncovered: 8,005,742,811 out of 14,547,261,565
Covered: 6,541,518,754 out of 14,547,261,565

Uncovered: 57,912,792 out of 133,674,966
Covered: 75,762,174 out of 133,674,966
Triticum urartu

Uncovered: 1,279,273,260 out of 4,851,895,022
Covered: 3,572,621,762 out of 4,851,895,022

Uncovered: 9,334,799 out of 41,813,638
Covered: 32,478,839 out of 41,813,638