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Triticum aestivum vs Triticum spelta Synteny results

The syntenic regions between Triticum aestivum (Triticum aestivum, IWGSC) and Triticum spelta (Triticum spelta, PGSBv2.0) were extracted from their pairwise alignment in Ensembl Plants release 113. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 535 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Triticum aestivum

Uncovered: 741,250,923 out of 14,547,261,565
Covered: 13,806,010,642 out of 14,547,261,565

Uncovered: 5,278,052 out of 133,674,966
Covered: 128,396,914 out of 133,674,966
Triticum spelta

Uncovered: 221,858,252 out of 14,000,336,401
Covered: 13,778,478,149 out of 14,000,336,401

Uncovered: 1,937,176 out of 128,797,843
Covered: 126,860,667 out of 128,797,843