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Vigna angularis vs Vigna radiata Synteny results

The syntenic regions between Vigna angularis (Vigna angularis, Vigan1.1) and Vigna radiata (Vigna radiata var. radiata, Vradiata_ver6) were extracted from their pairwise alignment in Ensembl Plants release 95. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 153 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Vigna angularis

Uncovered: 267,010,965 out of 466,744,453
Covered: 199,733,488 out of 466,744,453

Uncovered: 16,922,942 out of 37,822,470
Covered: 20,899,528 out of 37,822,470
Vigna radiata

Uncovered: 256,421,586 out of 463,085,359
Covered: 206,663,773 out of 463,085,359

Uncovered: 10,402,828 out of 28,307,530
Covered: 17,904,702 out of 28,307,530