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Medicago truncatula vs Vigna angularis Synteny results

The syntenic regions between Medicago truncatula (Medicago truncatula, MtrunA17r5.0_ANR) and Vigna angularis (Vigna angularis, Vigan1.1) were extracted from their pairwise alignment in Ensembl Plants release 112. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 83 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Medicago truncatula

Uncovered: 366,006,532 out of 429,196,467
Covered: 63,189,935 out of 429,196,467

Uncovered: 36,851,803 out of 45,081,035
Covered: 8,229,232 out of 45,081,035
Vigna angularis

Uncovered: 402,686,819 out of 466,744,453
Covered: 64,057,634 out of 466,744,453

Uncovered: 31,014,442 out of 37,822,470
Covered: 6,808,028 out of 37,822,470