Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: LSD1 AT4G20380

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Description

LSD1 zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:F4JUW0]

Location

Chromosome 4: 11,004,503-11,006,968 forward strand.

About this gene

This gene has 9 transcripts (splice variants), 148 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	AT4G20380.9	1464	129aa	AT4G20380.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B450	NM_001341436.1 NP_001328264.1
-	AT4G20380.7	1445	189aa	AT4G20380.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V4C0 P94077	NM_001036601.1 NM_001036602.2 NM_001036603.2 NM_001084944.2 NM_118157.5 NM_179217.4 NM_179218.4 NP_001031678.1 NP_001031679.1 NP_001031680.2 NP_001078413.1 NP_567599.3 NP_849548.1 NP_849549.1
-	AT4G20380.1	1364	184aa	AT4G20380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	NM_001036601.1 NM_001036602.2 NM_001036603.2 NM_118157.5 NM_179217.4 NP_001031678.1 NP_001031679.1 NP_001031680.2 NP_567599.3 NP_849548.1
-	AT4G20380.2	1260	189aa	AT4G20380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V4C0 P94077	NM_001036601.1 NM_001036602.2 NM_001036603.2 NM_001084944.2 NM_118157.5 NM_179217.4 NM_179218.4 NP_001031678.1 NP_001031679.1 NP_001031680.2 NP_001078413.1 NP_567599.3 NP_849548.1 NP_849549.1
-	AT4G20380.8	1248	210aa	AT4G20380.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JUW0	NM_001160785.1 NP_001154257.1
-	AT4G20380.6	1173	184aa	AT4G20380.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	NM_001036601.1 NM_001036602.2 NM_001036603.2 NM_118157.5 NM_179217.4 NP_001031678.1 NP_001031679.1 NP_001031680.2 NP_567599.3 NP_849548.1
-	AT4G20380.3	1141	184aa	AT4G20380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	NM_001036601.1 NM_001036602.2 NM_001036603.2 NM_118157.5 NM_179217.4 NP_001031678.1 NP_001031679.1 NP_001031680.2 NP_567599.3 NP_849548.1
-	AT4G20380.5	1090	184aa	AT4G20380.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	NM_001036601.1 NM_001036602.2 NM_001036603.2 NM_118157.5 NM_179217.4 NP_001031678.1 NP_001031679.1 NP_001031680.2 NP_567599.3 NP_849548.1
-	AT4G20380.4	1073	184aa	AT4G20380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	NM_001036601.1 NM_001036602.2 NM_001036603.2 NM_118157.5 NM_179217.4 NP_001031678.1 NP_001031679.1 NP_001031680.2 NP_567599.3 NP_849548.1

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Summary

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Gene-based displays