Prunus avium (PAV_r1.0)

About Prunus avium

Sweet cherry (Prunus avium) is a fruit tree of the Rosaceae family thought to have originated south of the Caucasian mountains and around the Caspian and Black Seas. Prunus avium is a diploid (2n=2x=16) with an estimated genome size of 352.9 Mb. The genome sequence of variety Satonishiki was produced by Kazusa DNA Research Institute.

Taxonomy ID 42229

Data source Kazusa DNA Research Institute

More information and statistics

Genome assembly: PAV_r1.0

More information and statistics

Download DNA sequence (FASTA)

Display your data in Ensembl Plants

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)


This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor