Amborella trichopoda

Amborella trichopoda

Data Source Amborella Genome Database | Taxonomy ID 13333

About Amborella trichopoda

Amborella trichopoda is a small, tropical shrub endemic to New Caledonia. It is the only species in the genus Amborella, which is the only member of the family Amborellaceae. As the only living species on the sister lineage to all other flowering plants, it is an important reference for studying plant evolution. Individual Amborella trichopoda are usually sprawling understory shrubs, although occasionally they grow up to eight meters high. They have evergreen leaves and small, white to yellow flowers. The species is dioecious; female plants producing carpals and males producing stamens, and individual plants can change sex between flowerings. Unlike nearly all other flowering plants, they do not posses vessel elements for water conduction. Amborella's genome is a relatively compact 870Mb, arranged into 13 chromosome pairs.

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Genomic alignments [2] [Show»«Hide
Amborella trichopoda : Arabidopsis thalianaTRANSLATED_BLAT_NET | stats
Amborella trichopoda : Oryza sativa JaponicaTRANSLATED_BLAT_NET | stats
]

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

About this species