Transcript: AT4G20380.7 LSD1-207

Description

LSD1 zinc finger family protein [Source:NCBI gene (formerly Entrezgene);Acc:827786]

Location

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 273 variant alleles and maps to 35 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LSD1-204	AT4G20380.8	1248	210aa	AT4G20380.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JUW0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
LSD1-202	AT4G20380.9	1464	129aa	AT4G20380.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B450	-	-
LSD1-207	AT4G20380.7	1445	189aa	AT4G20380.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V4C0 P94077	-	-
LSD1-201	AT4G20380.1	1364	184aa	AT4G20380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-
LSD1-205	AT4G20380.2	1260	189aa	AT4G20380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V4C0 P94077	-	-
LSD1-203	AT4G20380.6	1173	184aa	AT4G20380.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-
LSD1-206	AT4G20380.3	1141	184aa	AT4G20380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-
LSD1-208	AT4G20380.5	1090	184aa	AT4G20380.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-
LSD1-209	AT4G20380.4	1073	184aa	AT4G20380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,445 bps, Translation length: 189 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P94077

Version

AT4G20380.7

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.