Trifolium pratense

Trifolium pratense

Data Source TGAC | Taxonomy ID 57577

The red clover genome is a joint effort of TGAC and IBERS. This work was funded by an Institute Programme Grant to IBERS (BB/J004405/1) from the Biotechnology and Biological Sciences Research Council (BBSRC), by the ERANET Plant Genomics programme (ERAPG038A-TRANSLEG) and by a Capacity, Capability Challenge Programme from TGAC.

Red clover is one of the most important forage legume crops in temperate agriculture, and a key component of sustainable intensification of livestock farming systems. Red clover is a highly heterozygous diploid (2n = 2x = 14) species due to its gametophytic self-incompatibility system. This assembly provides a chromosome-scale reference draft genome for a red clover genotype of the variety Milvus (Milvus B). It was published in De Vega, J. J. et al. Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement [1].

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

About this species