About Brachypodium distachyon
Brachypodium distachyon, like Arabidopsis thaliana, has several features that recommend it as a model plant for functional genomic studies, especially in the grasses. It has a small, diploid genome (~355 Mb), small physical size, a short life-cycle and few growth requirements. Brachypodium is related to the major cereal grain species but is understood to be more closely related to the Triticeae (wheat and barley) than to the other cereals.
Taxonomy ID 15368
Data source Joint Genome Institute
What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.
Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3
What can I find? Homologues, gene trees, and whole genome alignments across multiple species.
More about comparative analyses
Phylogenetic overview of gene families
Download alignments (EMF)
What can I find? Short sequence variants.
More about variation in Ensembl Plants
Download all variants - GVF - VCF - VEP
Links (Brachypodium distachyon)
- Gramene species page for Brachypodium
- The International Brachypodium Initiative (IBI) community portal
- The John Innes Centre ModelCrop.org
- MIPS Brachypodium genome database
- Phytozome entry page for Brachypodium distachyon
- Jaiswal Lab at Oregon State University
- INSDC project PRJNA182761
Links (Triticum aestivum)
- MIPS Wheat Genome Database
- ENA study ERP000319: 454 pyrosequencing of the Triticum aestivum (bread wheat) genome to 5X coverage
- ENA study ERP001415: 454 sequencing of Triticum aestivum (bread wheat) cv. Chinese spring cDNA samples from a pool of tissues, from plants under drought stress and from circadian-sampled leaves
- Triticum aestivum ESTs at ENA
- Triticum aestivum UniGene cluster sequences at NCBI