Gramene

Ensembl Plants is a joint project of the European Bioinformatics Institute and the group of Doreen Ware at the Cold Spring Harbor Laboratory, who have developed the Gramene database [1,3,4,6], a resource for plant comparative genomics based on Ensembl technology [2,5,7]. Databases are constructed in a direct collaboration with the Gramene resource, funded by the United States National Science Foundation award #1127112.

A common set of databases are available through Ensembl Plants and Gramene, and the two groups are collaborating on the integration of content, quality control and the development of new features.

References

1. Tello-Ruiz MK, et al., Gramene 2021: harnessing the power of comparative genomics and pathways for plant research. Nucleic Acids Res. 2020.
   PubMed ID: 33170273
2. Howe KL., et al., Ensembl Genomes 2020-enabling non-vertebrate genomic research. Nucleic Acids Res. 2019.
   PubMed ID: 31598706
3. Tello-Ruiz MK., et al., Gramene 2018: unifying comparative genomics and pathway resources for plant research. Nucleic Acids Res. 2017. 46(D1):D1181-D1189
   PubMed ID: 29165610
4. Monaco MK., et al., Gramene 2013: comparative plant genomics resources. Nucleic Acids Res. 2014. 42:D1193-9.
   PubMed ID: 24217918
5. Kersey PJ., et al., Ensembl Genomes 2013: scaling up access to genome-wide data. Nucleic Acids Res. 2014. 42:D546-52.
   PubMed ID: 24163254
6. Youens-Clark, K., et al., Gramene database in 2010: updates and extensions. Nucleic Acids Res. 2010. 39:D1085-94
   PubMed ID: 21076153
7. Hubbard, T., et al., The Ensembl genome database project. Nucleic Acids Res. 2002. 30:38-41
   PubMed ID: 11752248