Oryza sativa Japonica

Oryza sativa Japonica Group

Data Source RAP-DB | Taxonomy ID 39947

About Oryza sativa Japonica

Oryza sativa Japonica (rice) is the staple food for 2.5 billion people. It is the grain with the second highest worldwide production after Zea mays. In addition to its agronomic importance, rice is an important model species for monocot plants and cereals such as maize, wheat, barley and sorghum. O. sativa has a compact diploid genome of approximately 500 Mbp (n=12) compared with the multi-gigabase genomes of maize, wheat and barley.

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Protein trees

Download alignments (EMF)

Genomic alignments [36] [Show»«Hide
Oryza sativa Japonica : Aegilops tauschiiLASTZ_NET | stats
Oryza sativa Japonica : Amborella trichopodaTRANSLATED_BLAT_NET | stats
Oryza sativa Japonica : Arabidopsis lyrataLASTZ_NET | stats
Oryza sativa Japonica : Arabidopsis thalianaLASTZ_NET | stats
Oryza sativa Japonica : Brachypodium distachyonLASTZ_NET | stats
Oryza sativa Japonica : Brassica rapaLASTZ_NET | stats
Oryza sativa Japonica : Chlamydomonas reinhardtiiLASTZ_NET | stats
Oryza sativa Japonica : Cyanidioschyzon merolaeLASTZ_NET | stats
Oryza sativa Japonica : Glycine maxLASTZ_NET | stats
Oryza sativa Japonica : Hordeum vulgareLASTZ_NET | stats
Oryza sativa Japonica : Leersia perrieriLASTZ_NET | stats
Oryza sativa Japonica : Medicago truncatulaLASTZ_NET | stats
Oryza sativa Japonica : Musa acuminataLASTZ_NET | stats
Oryza sativa Japonica : Oryza barthiiLASTZ_NET | stats
Oryza sativa Japonica : Oryza brachyanthaLASTZ_NET | stats
Oryza sativa Japonica : Oryza glaberrimaLASTZ_NET | stats
Oryza sativa Japonica : Oryza glumaepatulaLASTZ_NET | stats
Oryza sativa Japonica : Oryza longistaminataLASTZ_NET | stats
Oryza sativa Japonica : Oryza meridionalisLASTZ_NET | stats
Oryza sativa Japonica : Oryza nivaraLASTZ_NET | stats
Oryza sativa Japonica : Oryza punctataLASTZ_NET | stats
Oryza sativa Japonica : Oryza rufipogonLASTZ_NET | stats
Oryza sativa Japonica : Oryza sativa IndicaLASTZ_NET | stats
Oryza sativa Japonica : Physcomitrella patensLASTZ_NET | stats
Oryza sativa Japonica : Populus trichocarpaLASTZ_NET | stats
Oryza sativa Japonica : Prunus persicaLASTZ_NET | stats
Oryza sativa Japonica : Selaginella moellendorffiiLASTZ_NET | stats
Oryza sativa Japonica : Setaria italicaLASTZ_NET | stats
Oryza sativa Japonica : Solanum lycopersicumLASTZ_NET | stats
Oryza sativa Japonica : Solanum tuberosumLASTZ_NET | stats
Oryza sativa Japonica : Sorghum bicolorLASTZ_NET | stats
Oryza sativa Japonica : Theobroma cacaoLASTZ_NET | stats
Oryza sativa Japonica : Triticum aestivumLASTZ_NET | stats
Oryza sativa Japonica : Triticum urartuLASTZ_NET | stats
Oryza sativa Japonica : Vitis viniferaLASTZ_NET | stats
Oryza sativa Japonica : Zea maysLASTZ_NET | stats
]

About this species