Arabidopsis thaliana (TAIR10)

About Arabidopsis thaliana

Arabidopsis thaliana is a small flowering plant that is widely used as a model organism in plant biology. Arabidopsis is a member of the mustard (Brassicaceae) family, which includes cultivated species such as cabbage and radish. Arabidopsis is not of major agronomic significance, but its small genome size and ease of cultivation offer important advantages for basic research in genetics and molecular biology. Arabidopsis thaliana has a genome size of ~135 Mb, and a haploid chromosome number of five.

Taxonomy ID 3702

Data source The Arabidopsis Information Resource

More information and statistics

Genome assembly: TAIR10

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Download DNA sequence (FASTA)

Convert your data to TAIR10 coordinates

Display your data in Ensembl Plants

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

What can I find? Short sequence variants.

More about variation in Ensembl Plants

Download all variants - GVF - VCF - VEP

Variant Effect Predictor

Regulation

What can I find? Microarray annotations.

More about the Ensembl Plants microarray annotation strategy

About this species