About Populus trichocarpa
Populus trichocarpa (poplar) is a deciduous broadleaf tree that is native to Western North America. It is an economically important source of timber. Its rapid growth and compact genome size (~500 Mbp, n=18) has lead to its use as a model organism for tree species.
Taxonomy ID 3694
Data source JGI
What can I find? Homologues, gene trees, and whole genome alignments across multiple species.
Download alignments (EMF)
|Populus trichocarpa : Arabidopsis thaliana||LASTZ_NET | stats|
|Populus trichocarpa : Oryza sativa Japonica||LASTZ_NET | stats|
|Populus trichocarpa : Vitis vinifera||LASTZ_NET | stats|
This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:
What can I find? Microarray annotations.