Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G03960

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Description

Calcium-binding EF hand family protein [Source:NCBI gene (formerly Entrezgene);Acc:839361]

Gene Synonyms

F21M11.11, F21M11_11

Location

Chromosome 1: 1,013,643-1,017,957 forward strand.

About this gene

This gene has 7 transcripts (splice variants), 136 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G03960-203	AT1G03960.1	2422	529aa	AT1G03960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W4Q4 Q84JI6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G03960-201	AT1G03960.2	2555	389aa	AT1G03960.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT1G03960-204	AT1G03960.4	2531	389aa	AT1G03960.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT1G03960-202	AT1G03960.3	2518	389aa	AT1G03960.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT1G03960-205	AT1G03960.5	2509	500aa	AT1G03960.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMC5	-	-
AT1G03960-206	AT1G03960.6	2255	467aa	AT1G03960.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMC2	-	-
AT1G03960-207	AT1G03960.7	1529	328aa	AT1G03960.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMG0	-	-

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Summary

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