Transcript: AT1G03960.5 AT1G03960-205

Description

Calcium-binding EF hand family protein [Source:NCBI gene (formerly Entrezgene);Acc:839361]

Location

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 324 variant alleles and maps to 33 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G03960-203	AT1G03960.1	2422	529aa	AT1G03960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W4Q4 Q84JI6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G03960-201	AT1G03960.2	2555	389aa	AT1G03960.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT1G03960-204	AT1G03960.4	2531	389aa	AT1G03960.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT1G03960-202	AT1G03960.3	2518	389aa	AT1G03960.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT1G03960-205	AT1G03960.5	2509	500aa	AT1G03960.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMC5	-	-
AT1G03960-206	AT1G03960.6	2255	467aa	AT1G03960.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMC2	-	-
AT1G03960-207	AT1G03960.7	1529	328aa	AT1G03960.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMG0	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,509 bps, Translation length: 500 residues

Version

AT1G03960.5

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.