Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: LSD1 AT4G20380

.

Description

LSD1 zinc finger family protein [Source:NCBI gene (formerly Entrezgene);Acc:827786]

Gene Synonyms

F9F13.30, F9F13_30, LESION SIMULATING DISEASE, LESION SIMULATING DISEASE 1

Location

Chromosome 4: 11,004,503-11,006,968 forward strand.

About this gene

This gene has 9 transcripts (splice variants), 190 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LSD1-204	AT4G20380.8	1248	210aa	AT4G20380.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JUW0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
LSD1-202	AT4G20380.9	1464	129aa	AT4G20380.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B450	-	-
LSD1-207	AT4G20380.7	1445	189aa	AT4G20380.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V4C0 P94077	-	-
LSD1-201	AT4G20380.1	1364	184aa	AT4G20380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-
LSD1-205	AT4G20380.2	1260	189aa	AT4G20380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V4C0 P94077	-	-
LSD1-203	AT4G20380.6	1173	184aa	AT4G20380.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-
LSD1-206	AT4G20380.3	1141	184aa	AT4G20380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-
LSD1-208	AT4G20380.5	1090	184aa	AT4G20380.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-
LSD1-209	AT4G20380.4	1073	184aa	AT4G20380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V3Z8	-	-

.

Summary

.

.