Transcript: Zm00001eb429130_T001

Description

Zm00001e041470

Location

Chromosome 10: 140,487,881-140,491,067 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 480 variant alleles and maps to 17 oligo probes.

Gene

This transcript is a product of gene Zm00001eb429130 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb429130_T003	1664	455aa	Zm00001eb429130_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6JCY4 A0A3L6G7I3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb429130_T001	2146	353aa	Zm00001eb429130_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb429130_T004	1515	344aa	Zm00001eb429130_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb429130_T002	1170	248aa	Zm00001eb429130_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,146 bps, Translation length: 353 residues

Version

Zm00001eb429130_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb429130_T001

Summary

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Transcript: Zm00001eb429130_T001

Summary

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