Transcript: Zm00001eb422500_T003

Description

Zm00001e040882

Location

Chromosome 10: 119,440,636-119,442,739 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 523 variant alleles and maps to 4 oligo probes.

Gene

This transcript is a product of gene Zm00001eb422500 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb422500_T003	1859	428aa	Zm00001eb422500_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804RLA0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb422500_T001	2710	417aa	Zm00001eb422500_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804RJF9	-	-
-	Zm00001eb422500_T002	1771	333aa	Zm00001eb422500_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F894	-	-
-	Zm00001eb422500_T004	1764	333aa	Zm00001eb422500_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F894	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,859 bps, Translation length: 428 residues

Version

Zm00001eb422500_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb422500_T003

Summary

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Transcript: Zm00001eb422500_T003

Summary

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