Transcript: Zm00001eb401770_T001

Description

Zm00001e038867

Location

Chromosome 9: 156,810,982-156,815,342 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 10 domains and features, is associated with 861 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene Zm00001eb401770 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb401770_T003	1978	472aa	Zm00001eb401770_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6JQI8 A0A1D6JQI9 A0A1D6PIW5 A0A1D6PIW6 A0A317Y566 A0A3L6DED8 A0A3L6E3L8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb401770_T001	2126	468aa	Zm00001eb401770_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6T9J5	-	-
-	Zm00001eb401770_T002	2079	468aa	Zm00001eb401770_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6T9J5	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,126 bps, Translation length: 468 residues

Version

Zm00001eb401770_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb401770_T001

Summary

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Transcript: Zm00001eb401770_T001

Summary

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