Transcript: Zm00001eb395090_T001

Description

Zm00001e038235

Location

Chromosome 9: 136,787,410-136,813,923 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 14 domains and features, is associated with 1196 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene Zm00001eb395090 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb395090_T002	3737	1036aa	Zm00001eb395090_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6PAV4 A0A1D6PAV5 A0A1D6PAW4 A0A1D6PAW7 A0A3L6DD66 K7VZS5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb395090_T001	3727	828aa	Zm00001eb395090_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6PAV3 A0A1D6PAV7 A0A1D6PAW5 A0A1D6PAW8	-	-
-	Zm00001eb395090_T003	3449	1006aa	Zm00001eb395090_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 19, Coding exons: 15, Transcript length: 3,727 bps, Translation length: 828 residues

Version

Zm00001eb395090_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb395090_T001

Summary

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Transcript: Zm00001eb395090_T001

Summary

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