Transcript: Zm00001eb393280_T001

Description

Zm00001e038059

Location

Chromosome 9: 129,855,032-129,866,210 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 12 domains and features, is associated with 797 variant alleles and maps to 23 oligo probes.

Gene

This transcript is a product of gene Zm00001eb393280 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb393280_T002	3329	1029aa	Zm00001eb393280_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6P8K0 A0A1D6P8K2 A0A1D6P8K3 A0A1D6P8K5 A0A1D6P8K6 A0A1D6P8K7 A0A1D6P8K8 A0A1D6P8K9 A0A1D6P8L0 A0A3L6DGH6 K7WCZ1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb393280_T001	4086	720aa	Zm00001eb393280_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6P8K1 A0A1D6P8L2 A0A1D6P8L4	-	-

Summary

Statistics

Exons: 17, Coding exons: 15, Transcript length: 4,086 bps, Translation length: 720 residues

Version

Zm00001eb393280_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb393280_T001

Summary

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Transcript: Zm00001eb393280_T001

Summary

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