Transcript: Zm00001eb385720_T001

Description

Zm00001e037341

Location

Chromosome 9: 90,592,339-90,595,953 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 319 variant alleles and maps to 22 oligo probes.

Gene

This transcript is a product of gene Zm00001eb385720 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb385720_T003	1708	379aa	Zm00001eb385720_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6P2K0 A0A1D6P2K2 A0A1D6P2K3 B4FGS0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb385720_T002	1688	379aa	Zm00001eb385720_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FGS0	-	-
-	Zm00001eb385720_T001	1672	376aa	Zm00001eb385720_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6P2J9 B6U0F3	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,672 bps, Translation length: 376 residues

Version

Zm00001eb385720_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb385720_T001

Summary

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Transcript: Zm00001eb385720_T001

Summary

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