Transcript: Zm00001eb381570_T003

Description

Zm00001e036920

Location

Chromosome 9: 47,331,379-47,334,356 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 15 domains and features, is associated with 204 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene Zm00001eb381570 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb381570_T001	1972	530aa	Zm00001eb381570_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NZM7 A0A1D6NZM9 A0A3L6DI35 K7V8P4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb381570_T002	1962	271aa	Zm00001eb381570_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6IY43 A0A1D6NZN0 A0A1D6NZN1	-	-
-	Zm00001eb381570_T003	1623	436aa	Zm00001eb381570_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6IGY1 A0A1D6IGY6 A0A1D6JCS2 A0A1D6JCS4	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 1,623 bps, Translation length: 436 residues

Version

Zm00001eb381570_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb381570_T003

Summary

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Transcript: Zm00001eb381570_T003

Summary

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