Transcript: Zm00001eb374280_T001

Description

Zm00001e036279

Location

Chromosome 9: 13,257,078-13,262,975 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 247 variant alleles and maps to 24 oligo probes.

Gene

This transcript is a product of gene Zm00001eb374280 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb374280_T002	1546	346aa	Zm00001eb374280_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NTA3 A0A3L6DF29 B0ZBJ1 K7V9W0 Q94EV8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb374280_T001	1599	326aa	Zm00001eb374280_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb374280_T003	1490	254aa	Zm00001eb374280_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,599 bps, Translation length: 326 residues

Version

Zm00001eb374280_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb374280_T001

Summary

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Transcript: Zm00001eb374280_T001

Summary

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