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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb360540_T004

Description

Zm00001e028088

Location

Chromosome 8: 155,435,018-155,439,952 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features, is associated with 533 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene Zm00001eb360540 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb360540_T0031817353aaZm00001eb360540_P003
 
Protein coding
A0A1D6G2F2 A0A1D6G2F3 A0A1D6G2F4
A0A1D6G2F9 A0A3L6DL59 B7ZXL5
C4J942 		-Ensembl Canonical
-Zm00001eb360540_T0021779353aaZm00001eb360540_P002
 
Protein coding
B7ZXL5 --
-Zm00001eb360540_T0011703353aaZm00001eb360540_P001
 
Protein coding
B7ZXL5 --
-Zm00001eb360540_T0051527246aaZm00001eb360540_P005
 
Protein coding
K7V8A6 --
-Zm00001eb360540_T0041417210aaZm00001eb360540_P004
 
Protein coding
A0A1D6G2G5 A0A1D6G2G7 A0A1D6G2G9
B7ZZQ4 		--

Summary

Statistics

Exons: 12, Coding exons: 6, Transcript length: 1,417 bps, Translation length: 210 residues

Version

Zm00001eb360540_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.