Transcript: Zm00001eb252400_T003

Description

Zm00001e015614

Location

Chromosome 5: 210,017,589-210,033,429 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 7 domains and features, is associated with 1144 variant alleles and maps to 49 oligo probes.

Gene

This transcript is a product of gene Zm00001eb252400 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb252400_T001	3397	961aa	Zm00001eb252400_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6HHW2 A0A1D6HHW3 A0A1D6HHW4 A0A1D6HHW5 A0A1D6HHW7 A0A1D6HHW9 A0A1D6HHX1 A0A1D6HHX4 A0A1D6HHX5 A0A3L6EKL2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb252400_T003	3240	541aa	Zm00001eb252400_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb252400_T002	3150	617aa	Zm00001eb252400_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6HHX0	-	-

Summary

Statistics

Exons: 18, Coding exons: 10, Transcript length: 3,240 bps, Translation length: 541 residues

Version

Zm00001eb252400_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb252400_T003

Summary

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Transcript: Zm00001eb252400_T003

Summary

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