Transcript: Zm00001eb249530_T002

Description

Zm00001e133467

Location

Chromosome 5: 196,324,924-196,330,890 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 756 variant alleles and maps to 15 oligo probes.

Gene

This transcript is a product of gene Zm00001eb249530 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb249530_T001	804	267aa	Zm00001eb249530_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804PL09	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb249530_T003	741	246aa	Zm00001eb249530_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804PLK1	-
-	Zm00001eb249530_T002	729	242aa	Zm00001eb249530_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804PKN4	-
-	Zm00001eb249530_T004	705	234aa	Zm00001eb249530_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804PKJ5	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 729 bps, Translation length: 242 residues

Version

Zm00001eb249530_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb249530_T002

Summary

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Transcript: Zm00001eb249530_T002

Summary

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