EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Zea mays (Zm-B73-REFERENCE-NAM-5.0)
Description

Zm00001e013992

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 630 variant alleles and maps to 48 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb235440_T0062759752aaZm00001eb235440_P006
 
Protein coding
--Ensembl Canonical
-Zm00001eb235440_T0093908649aaZm00001eb235440_P009
 
Protein coding
---
-Zm00001eb235440_T0033199649aaZm00001eb235440_P003
 
Protein coding
---
-Zm00001eb235440_T0012924574aaZm00001eb235440_P001
 
Protein coding
---
-Zm00001eb235440_T0052902574aaZm00001eb235440_P005
 
Protein coding
---
-Zm00001eb235440_T0022850608aaZm00001eb235440_P002
 
Protein coding
---
-Zm00001eb235440_T0042739608aaZm00001eb235440_P004
 
Protein coding
---
-Zm00001eb235440_T0072679608aaZm00001eb235440_P007
 
Protein coding
---
-Zm00001eb235440_T0082675724aaZm00001eb235440_P008
 
Protein coding
A0A1D6H3H9 A0A3L6EMU0 B6UDB9
C4J5N7
--
Statistics

Exons: 5, Coding exons: 3, Transcript length: 2,924 bps, Translation length: 574 residues

Version

Zm00001eb235440_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.