Transcript: Zm00001eb221860_T003

Description

Zm00001e012693

Location

Chromosome 5: 30,440,327-30,446,323 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 11 variant alleles and maps to 20 oligo probes.

Gene

This transcript is a product of gene Zm00001eb221860 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb221860_T002	2601	540aa	Zm00001eb221860_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GPL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb221860_T001	2555	540aa	Zm00001eb221860_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GPK0 A0A1D6GPK1 A0A1D6GPK2 A0A1D6GPK7 A0A1D6GPK8 A0A1D6GPL1 A0A1D6GPL2 A0A3L6EN62	-
-	Zm00001eb221860_T003	737	241aa	Zm00001eb221860_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6KTG8	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 737 bps, Translation length: 241 residues

Version

Zm00001eb221860_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb221860_T003

Summary

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Transcript: Zm00001eb221860_T003

Summary

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