Transcript: Zm00001eb198450_T002

Description

Zm00001e024252

Location

Chromosome 4: 200,633,295-200,642,512 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 26 domains and features, is associated with 982 variant alleles and maps to 102 oligo probes.

Gene

This transcript is a product of gene Zm00001eb198450 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb198450_T003	3435	937aa	Zm00001eb198450_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6QJ59 A0A1D6QJ60 A0A3L6EXV4 B6U0P5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb198450_T001	3489	904aa	Zm00001eb198450_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4J9A7	-	-
-	Zm00001eb198450_T002	3395	905aa	Zm00001eb198450_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 3,395 bps, Translation length: 905 residues

Version

Zm00001eb198450_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb198450_T002

Summary

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Transcript: Zm00001eb198450_T002

Summary

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