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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb192910_T001

Description

Zm00001e023744

Location

Chromosome 4: 180,804,799-180,816,362 reverse strand.

About this transcript

This transcript has 26 exons, is annotated with 16 domains and features, is associated with 1007 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene Zm00001eb192910 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb192910_T00439741060aaZm00001eb192910_P004
 
Protein coding
A0A1D6QCZ8 A0A1D6QCZ9 A0A1D6QD05
A0A1D6QD07 A0A1D6QD13 A0A1D6QD27
A0A1D6QD32 A0A1D6QD43 A0A3L6EIU5
A0A3L6FCN0 K7U1S1 K7V0N2
O04709 		-Ensembl Canonical
-Zm00001eb192910_T0014254770aaZm00001eb192910_P001
 
Protein coding
A0A1D6QD29 A0A1D6QD30 A0A1D6QD47
--
-Zm00001eb192910_T0023948782aaZm00001eb192910_P002
 
Protein coding
A0A1D6QD04 A0A1D6QD42 --
-Zm00001eb192910_T0033836782aaZm00001eb192910_P003
 
Protein coding
A0A1D6QD04 --

Summary

Statistics

Exons: 26, Coding exons: 19, Transcript length: 4,254 bps, Translation length: 770 residues

Version

Zm00001eb192910_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.