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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb187440_T001

Description

Zm00001e023246

Location

Chromosome 4: 161,827,530-161,833,546 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 46 domains and features, is associated with 827 variant alleles and maps to 10 oligo probes.

Gene

This transcript is a product of gene Zm00001eb187440 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb187440_T00141501067aaZm00001eb187440_P001
 
Protein coding
A0A1D6Q734 A0A1D6Q737 A0A1D6Q743
A0A1D6Q744 A0A1D6Q745 A0A3L6EW69
-Ensembl Canonical
-Zm00001eb187440_T00241921065aaZm00001eb187440_P002
 
Protein coding
A0A1D6HG44 A0A1D6Q730 A0A1D6Q746
--
-Zm00001eb187440_T0044050823aaZm00001eb187440_P004
 
Protein coding
A0A1D6Q747 --
-Zm00001eb187440_T00339611038aaZm00001eb187440_P003
 
Protein coding
A0A1D6Q733 A0A1D6Q736 A0A1D6Q749
A0A3L6EKT5 		--
-Zm00001eb187440_T00537121058aaZm00001eb187440_P005
 
Protein coding
A0A1D6Q738 A0A1D6Q748 --

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,150 bps, Translation length: 1,067 residues

Version

Zm00001eb187440_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.