Transcript: Zm00001eb173270_T002

Description

Zm00001e021793

Location

Chromosome 4: 38,432,019-38,436,976 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 615 variant alleles and maps to 58 oligo probes.

Gene

This transcript is a product of gene Zm00001eb173270 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb173270_T001	2070	331aa	Zm00001eb173270_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6T3T8 C0HGP8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb173270_T002	2130	218aa	Zm00001eb173270_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb173270_T003	1960	331aa	Zm00001eb173270_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb173270_T004	1159	177aa	Zm00001eb173270_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 6, Coding exons: 1, Transcript length: 2,130 bps, Translation length: 218 residues

Version

Zm00001eb173270_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb173270_T002

Summary

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Transcript: Zm00001eb173270_T002

Summary

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