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Zea mays (Zm-B73-REFERENCE-NAM-5.0)
Description

Zm00001e020659

About this transcript

This transcript has 19 exons, is annotated with 30 domains and features, is associated with 1534 variant alleles and maps to 116 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb161700_T0053146849aaZm00001eb161700_P005
 
Protein coding
A0A1D6NLP2 A0A1D6NLP7 A0A1D6NLQ0
A0A1D6NLQ7 A0A1D6NLQ8 A0A1D6NLR9
A0A3L6FC82
-Ensembl Canonical
-Zm00001eb161700_T0013382651aaZm00001eb161700_P001
 
Protein coding
---
-Zm00001eb161700_T0023382651aaZm00001eb161700_P002
 
Protein coding
A0A1D6NLP6 --
-Zm00001eb161700_T0033197836aaZm00001eb161700_P003
 
Protein coding
A0A1D6NLP3 A0A1D6NLQ6 A0A1D6NLR2
A0A1D6NLR5 A0A1D6NLR6 A0A3L6FBA4
C0PFT9
--
-Zm00001eb161700_T0043156678aaZm00001eb161700_P004
 
Protein coding
A0A3L6D7K9 --
-Zm00001eb161700_T0062976825aaZm00001eb161700_P006
 
Protein coding
A0A1D6NLP9 A0A1D6NLR4 --
Statistics

Exons: 19, Coding exons: 17, Transcript length: 3,156 bps, Translation length: 678 residues

Version

Zm00001eb161700_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.