Transcript: Zm00001eb155350_T001

Description

Zm00001e020016

Location

Chromosome 3: 209,926,926-209,931,951 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 8 domains and features, is associated with 850 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene Zm00001eb155350 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb155350_T003	2636	656aa	Zm00001eb155350_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NEF2 A0A1D6NEF3 A0A1D6NEF8 A0A1D6NEG1 A0A3L6FHB2 C0P737 C9WMM7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb155350_T001	2955	504aa	Zm00001eb155350_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb155350_T002	2647	574aa	Zm00001eb155350_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 16, Coding exons: 13, Transcript length: 2,955 bps, Translation length: 504 residues

Version

Zm00001eb155350_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb155350_T001

Summary

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Transcript: Zm00001eb155350_T001

Summary

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