Transcript: Zm00001eb138120_T002

Description

Zm00001e018331

Location

Chromosome 3: 136,841,905-136,849,494 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 1029 variant alleles and maps to 18 oligo probes.

Gene

This transcript is a product of gene Zm00001eb138120 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb138120_T003	956	192aa	Zm00001eb138120_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb138120_T001	1148	154aa	Zm00001eb138120_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb138120_T002	914	188aa	Zm00001eb138120_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6FCT1 B6U5W3	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 914 bps, Translation length: 188 residues

Version

Zm00001eb138120_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb138120_T002

Summary

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Transcript: Zm00001eb138120_T002

Summary

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