Transcript: Zm00001eb125120_T001

Description

Zm00001e016998

Location

Chromosome 3: 21,435,738-21,438,567 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 574 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene Zm00001eb125120 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb125120_T002	2462	517aa	Zm00001eb125120_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb125120_T001	2574	451aa	Zm00001eb125120_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb125120_T003	2053	437aa	Zm00001eb125120_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6MLY1 A0A3L6FRP3	-	-
-	Zm00001eb125120_T004	2000	371aa	Zm00001eb125120_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 2,574 bps, Translation length: 451 residues

Version

Zm00001eb125120_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb125120_T001

Summary

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Transcript: Zm00001eb125120_T001

Summary

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