Transcript: Zm00001eb080610_T004

Description

Zm00001e007896

Location

Chromosome 2: 43,273,622-43,275,636 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 1146 variant alleles and maps to 16 oligo probes.

Gene

This transcript is a product of gene Zm00001eb080610 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb080610_T002	3368	394aa	Zm00001eb080610_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb080610_T001	3339	379aa	Zm00001eb080610_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb080610_T004	1567	314aa	Zm00001eb080610_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PBQ2	-
-	Zm00001eb080610_T003	1562	326aa	Zm00001eb080610_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E936 A0A3L6FQB0	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,567 bps, Translation length: 314 residues

Version

Zm00001eb080610_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb080610_T004

Summary

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Transcript: Zm00001eb080610_T004

Summary

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