Transcript: Zm00001eb071860_T001

Description

Zm00001e007055

Location

Chromosome 2: 12,767,897-12,772,775 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 820 variant alleles and maps to 49 oligo probes.

Gene

This transcript is a product of gene Zm00001eb071860 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb071860_T001	1450	310aa	Zm00001eb071860_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E0Q3 A0A3L6G0R8 B4FWV9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb071860_T003	1532	230aa	Zm00001eb071860_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E0Q0	-	-
-	Zm00001eb071860_T002	1393	222aa	Zm00001eb071860_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E0Q2	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,450 bps, Translation length: 310 residues

Version

Zm00001eb071860_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb071860_T001

Summary

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Transcript: Zm00001eb071860_T001

Summary

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