Transcript: Zm00001eb060480_T001

Description

Zm00001e005960

Location

Chromosome 1: 293,955,481-293,956,846 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 279 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene Zm00001eb060480 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb060480_T001	1190	232aa	Zm00001eb060480_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804M5E5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb060480_T003	1270	200aa	Zm00001eb060480_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804M5E7	-
-	Zm00001eb060480_T004	1151	157aa	Zm00001eb060480_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804M5E8	-
-	Zm00001eb060480_T002	988	201aa	Zm00001eb060480_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6L7H0	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,190 bps, Translation length: 232 residues

Version

Zm00001eb060480_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb060480_T001

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: Zm00001eb060480_T001

Summary

About Us

Get help

Our sister sites

Follow us