Transcript: Zm00001eb042060_T001

Description

Zm00001e004187

Location

Chromosome 1: 221,568,418-221,575,304 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 20 domains and features, is associated with 1172 variant alleles and maps to 53 oligo probes.

Gene

This transcript is a product of gene Zm00001eb042060 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb042060_T002	2897	719aa	Zm00001eb042060_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6KPL2 A0A1D6KPL3 A0A317Y6K6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb042060_T001	2871	600aa	Zm00001eb042060_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb042060_T003	2248	548aa	Zm00001eb042060_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 2,871 bps, Translation length: 600 residues

Version

Zm00001eb042060_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb042060_T001

Summary

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Transcript: Zm00001eb042060_T001

Summary

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