EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb415740_T005

Description

Zm00001e040213

Location

Chromosome 10: 79,417,433-79,422,924 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 1010 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene Zm00001eb415740 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb415740_T0012732710aaZm00001eb415740_P001
 
Protein coding
A0A1D6J038 A0A1D6J039 A0A3L6G4U5
-Ensembl Canonical
-Zm00001eb415740_T0032629507aaZm00001eb415740_P003
 
Protein coding
---
-Zm00001eb415740_T0022594664aaZm00001eb415740_P002
 
Protein coding
C0PCM0 --
-Zm00001eb415740_T0052443708aaZm00001eb415740_P005
 
Protein coding
---
-Zm00001eb415740_T0041847415aaZm00001eb415740_P004
 
Protein coding
---

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,443 bps, Translation length: 708 residues

Version

Zm00001eb415740_T005

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.