EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb213320_T001

Description

Zm00001e011903

Location

Chromosome 5: 5,051,526-5,057,483 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 917 variant alleles and maps to 26 oligo probes.

Gene

This transcript is a product of gene Zm00001eb213320 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
-Zm00001eb213320_T0062534511aaZm00001eb213320_P006
 
Protein coding
A0A1D6GG05 A0A1D6GG12 A0A1D6GG19
C4J2K4 		Ensembl Canonical
-Zm00001eb213320_T0022019402aaZm00001eb213320_P002
 
Protein coding
--
-Zm00001eb213320_T0031958335aaZm00001eb213320_P003
 
Protein coding
--
-Zm00001eb213320_T0011940335aaZm00001eb213320_P001
 
Protein coding
--
-Zm00001eb213320_T0041883413aaZm00001eb213320_P004
 
Protein coding
A0A1D6GG08 A0A1D6GG18 A0A3L6ESW0
-
-Zm00001eb213320_T0051827406aaZm00001eb213320_P005
 
Protein coding
A0A1D6GG15 -
-Zm00001eb213320_T0071683406aaZm00001eb213320_P007
 
Protein coding
A0A1D6GG15 -

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,940 bps, Translation length: 335 residues

Version

Zm00001eb213320_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.