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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb213320_T004

Description

Zm00001e011903

Location

Chromosome 5: 5,051,684-5,057,472 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 916 variant alleles and maps to 27 oligo probes.

Gene

This transcript is a product of gene Zm00001eb213320 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
-Zm00001eb213320_T0062534511aaZm00001eb213320_P006
 
Protein coding
A0A1D6GG05 A0A1D6GG12 A0A1D6GG19
C4J2K4 		Ensembl Canonical
-Zm00001eb213320_T0022019402aaZm00001eb213320_P002
 
Protein coding
--
-Zm00001eb213320_T0031958335aaZm00001eb213320_P003
 
Protein coding
--
-Zm00001eb213320_T0011940335aaZm00001eb213320_P001
 
Protein coding
--
-Zm00001eb213320_T0041883413aaZm00001eb213320_P004
 
Protein coding
A0A1D6GG08 A0A1D6GG18 A0A3L6ESW0
-
-Zm00001eb213320_T0051827406aaZm00001eb213320_P005
 
Protein coding
A0A1D6GG15 -
-Zm00001eb213320_T0071683406aaZm00001eb213320_P007
 
Protein coding
A0A1D6GG15 -

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,883 bps, Translation length: 413 residues

Version

Zm00001eb213320_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.