Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TRIDC7BG042690

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Description

Class-I type histone deacetylase, Seedling root growt [Source: Projected from Oryza sativa (Os06g0583400)]

Location

Chromosome 7B: 485,416,028-485,426,640 forward strand.

About this gene

This gene has 10 transcripts (splice variants), 150 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	TRIDC7BG042690.1	2148	571aa	TRIDC7BG042690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TRIDC7BG042690.9	1503	340aa	TRIDC7BG042690.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC7BG042690.8	1496	370aa	TRIDC7BG042690.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC7BG042690.5	1371	457aa	TRIDC7BG042690.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC7BG042690.3	1235	411aa	TRIDC7BG042690.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC7BG042690.4	1222	407aa	TRIDC7BG042690.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC7BG042690.6	1179	362aa	TRIDC7BG042690.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC7BG042690.2	1094	338aa	TRIDC7BG042690.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC7BG042690.7	989	329aa	TRIDC7BG042690.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC7BG042690.10	620	62aa	TRIDC7BG042690.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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