Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
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ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS1A02G088000

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Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A341NHX2]

Location

Chromosome 1A: 76,022,646-76,031,768 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 190 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS1A02G088000.2	3163	964aa	TraesCS1A02G088000.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341NHX2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS1A02G088000.3	3534	890aa	TraesCS1A02G088000.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5S274 A0A1D5SP03 W5ANQ6	-
-	TraesCS1A02G088000.1	3438	858aa	TraesCS1A02G088000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5S273	-
-	TraesCS1A02G088000.4	1668	555aa	TraesCS1A02G088000.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341NH28	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data