Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Homoeologues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS5D02G170100

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Location

Chromosome 5D: 266,751,990-266,769,489 reverse strand.

About this gene

This gene has 7 transcripts (splice variants) and 139 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS5D02G170100.5	3862	1130aa	TraesCS5D02G170100.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341VWT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS5D02G170100.1	3889	1036aa	TraesCS5D02G170100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341VZE7	-
-	TraesCS5D02G170100.4	3865	1083aa	TraesCS5D02G170100.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341VWG2	-
-	TraesCS5D02G170100.3	3847	1022aa	TraesCS5D02G170100.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341W6W6	-
-	TraesCS5D02G170100.2	3838	1019aa	TraesCS5D02G170100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341WDE3	-
-	TraesCS5D02G170100.6	3249	1015aa	TraesCS5D02G170100.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341VZF4	-
-	TraesCS5D02G170100.7	3141	924aa	TraesCS5D02G170100.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341WDE8	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data