Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Homoeologues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS5D02G105600

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Location

Chromosome 5D: 119,490,537-119,494,976 reverse strand.

About this gene

This gene has 5 transcripts (splice variants) and 40 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS5D02G105600.5	1313	318aa	TraesCS5D02G105600.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341W482	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS5D02G105600.4	1277	306aa	TraesCS5D02G105600.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5G4W4	-
-	TraesCS5D02G105600.2	1241	294aa	TraesCS5D02G105600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341VUI9	-
-	TraesCS5D02G105600.3	1169	270aa	TraesCS5D02G105600.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341VWT3	-
-	TraesCS5D02G105600.1	1132	282aa	TraesCS5D02G105600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6A1V2 A0A1D6A1V3 A0A341VUA7	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data